Publications

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Clinical Neuroscience
Computational Neuroscience
Analytics Method Development
The Role of Structural Connectivity on Brain Function Through a Markov Model of Signal Transmission
PLoS ONE
•
2025
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Clinical Neuroscience
Higher Fasting Brain Glucose is Associated with Lower Gray Matter Volume in Healthy Adults
Journal of Cerebral Blood Flow and Metabolism
•
2026
Clinical Neuroscience
Functional dissection of neural circuit activity by novel behavioral task paradigms
Pre Print
Basic Neuroscience
Clinical Neuroscience
Computational Neuroscience
Analytics Method Development
Instrumentation Development
Integration of Metabolic Flux Equations for Neurotransmitter Cycling Predicts Glutamate and GABA Dynamics in Response to Ketone Body Administration
bioRxiv (preprint)
•
preprint
Basic Neuroscience
Computational Neuroscience
Analytics Method Development
Scientific Machine Learning of Chaotic Systems Discovers Governing Equations for Neural Populations
arXiv (preprint)
•
2025
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Clinical Neuroscience
Functional Network Segregation and Spatial Transcriptomics Map Overlapping Effects of Diabetes and Sex in Brain Aging
Brain Communications
•
2025
Basic Neuroscience
Clinical Neuroscience
Analytics Method Development
Mechanistic Signatures of Comorbid PTSD with Cognitive Impairment Implicate Cortisol-Induced Neural Toxicity
Neuropsychopharmacology
•
2026
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Basic Neuroscience
Clinical Neuroscience
Computational Neuroscience
Analytics Method Development
Instrumentation Development
Opportunities and Challenges in Precision Neurotherapeutics
Annual Review of Biomedical Engineering
•
2026
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Basic Neuroscience
Clinical Neuroscience
Computational Neuroscience
Analytics Method Development
Biomimetic Model of Corticostriatal Micro-Assemblies Discovers a Neural Code
Nature Communications
•
2025
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Clinical Neuroscience
Shared and Distinct Alterations in Brain Structure of Youth with Internalizing or Externalizing Disorders: Findings from the ENIGMA Antisocial Behavior, ADHD, MDD, and Anxiety Working Groups
Biological Psychiatry
•
2025
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Clinical Neuroscience
Brain and Body Energy Metabolism and Potential for Treatment of Psychiatric Disorders
Nature Mental Health
•
2025
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Clinical Neuroscience
Ketosis Elevates Antioxidants and Markers of Energy Metabolism: A 1H MR Spectroscopy Study
Biological Psychiatry: Cognitive Neuroscience and Neuroimaging
•
2025
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Analytics Method Development
Increasing Spectral DCM Flexibility and Speed by Leveraging Julia's ModelingToolkit and Automated Differentiation
Imaging Neuroscience
•
2025
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Clinical Neuroscience
Brain Aging Shows Nonlinear Transitions, Suggesting a Midlife "Critical Window" for Metabolic Intervention
Proceedings of the National Academy of Sciences of the USA
•
2025
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Clinical Neuroscience
Challenges and Frontiers in Computational Metabolic Psychiatry
Biological Psychiatry: Cognitive Neuroscience and Neuroimaging
•
2025
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Analytics Method Development
Parameter Estimation from an Ornstein-Uhlenbeck Process with Measurement Noise
Physical Review E
•
2024
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Computational Neuroscience
Analytics Method Development
Achieving Occam's Razor: Deep Learning for Optimal Model Reduction
PLoS Computational Biology
•
2024
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Clinical Neuroscience
Brain Signaling Becomes Less Integrated and More Segregated with Age
Network Neuroscience
•
2024
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Basic Neuroscience
D-β-Hydroxybutyrate Stabilizes Hippocampal CA3-CA1 Circuit During Acute Insulin Resistance
PNAS Nexus
•
2024
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Basic Neuroscience
Clinical Neuroscience
Computational Neuroscience
Analytics Method Development
Ketosis Regulates K+ Ion Channels, Strengthening Brain-Wide Signaling Disrupted by Age
Imaging Neuroscience
•
2024
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Analytics Method Development
Quantifying Individual Variability in Neural Control Circuit Regulation Using Single-Subject fMRI
Copmutational Brain & Behavior
•
2023
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Computational Neuroscience
Basic Neuroscience
Analytics Method Development
Early Path Dominance as a Principle for Neurodevelopment
Proceedings of the National Academy of Sciences of the USA
•
2023
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Basic Neuroscience
Computational Neuroscience
Ion Gradient-Driven Bifurcations of a Multi-Scale Neuronal Model
Chaos, Solitons & Fractals
•
2023
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Clinical Neuroscience
Acute Administration of Ketone Beta-Hydroxybutyrate Downregulates 7T Proton Magnetic Resonance Spectroscopy-Derived Levels of Anterior and Posterior Cingulate GABA and Glutamate in Healthy Adults
Neuropsychopharmacology
•
2023
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Clinical Neuroscience
Type 2 Diabetes Mellitus Accelerates Brain Aging and Cognitive Decline: Complementary Findings from UK Biobank and Meta-Analyses
eLife
•
2022
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Instrumentation Development
Detection of COVID-19 Using Multimodal Data from a Wearable Device: Results from the First TemPredict Study
Scientific Reports
•
2022
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Clinical Neuroscience
ENIGMA-Anxiety Working Group: Rationale for and Organization of Large-Scale Neuroimaging Studies of Anxiety Disorders
Human Brain Mapping
•
2022
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Clinical Neuroscience
NeuroPredictome: A data-driven predictome linking neuroimaging to phenotype
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
•
2021
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Instrumentation Development
Development of an MRI-Compatible Nasal Drug Delivery Method for Probing Nicotine Addiction Dynamics
Pharmaceutics
•
2021
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Clinical Neuroscience
Analytics Method Development
Metabolism Modulates Network Synchrony in the Aging Brain
Proceedings of the National Academy of Sciences of the USA
•
2021
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Basic Neuroscience
Analytics Method Development
The Refractory Period Matters: Unifying Mechanisms of Macroscopic Brain Waves
Neural Computation
•
2021
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Analytics Method Development
Machine Learning Predicts Outcomes of Phase III Clinical Trials for Prostate Cancer
Algorithms
•
2021
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Clinical Neuroscience
Cortical and Subcortical Brain Structure in Generalized Anxiety Disorder: Findings from 28 Research Sites in the ENIGMA-Anxiety Working Group
Translational Psychiatry
•
2021
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Basic Neuroscience
Computational Neuroscience
Unique Scales Preserve Self-Similar Integrate-and-Fire Functionality of Neuronal Clusters
Scientific Reports
•
2021
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Instrumentation Development
"Ground-Truth" Resting-State Signal Provides Data-Driven Estimation and Correction for Scanner Distortion of fMRI Timeseries Dynamics
Neuroimage
•
2021
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Analytics Method Development
Fast Spatial Autocorrelation
Proceedings of the IEEE International Conference on Data Mining (ICDM)
•
2020
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Analytics Method Development
Inferring a Network from Dynamical Signals at Its Nodes
PLOS Computational Biology
•
2020
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Clinical Neuroscience
Mega-Analysis Methods in ENIGMA: The Experience of the Generalized Anxiety Disorder Working Group
Human Brain Mapping
•
2022
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Computational Neuroscience
Analytics Method Development
Making Sense of Computational Psychiatry
International Journal of Neuropsychopharmacology
•
2020
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Clinical Neuroscience
Diet Modulates Brain Network Stability, a Biomarker for Brain Aging, in Young Adults
Proceedings of the National Academy of Sciences of the USA
•
2020
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Clinical Neuroscience
Oxytocin Attenuates Trust as a Subset of More General Reinforcement Learning in Males
NeuroImage
•
2018
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Clinical Neuroscience
Computational Neuroscience
From Anxious to Reckless: A Control Systems Approach Unifies Prefrontal-Limbic Regulation Across the Spectrum of Threat Detection
Frontiers in Neuroscience
•
2017
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Clinical Neuroscience
Lost Emotion: Disrupted Brain-Based Tracking of Dynamic Affective Episodes in Anxiety and Depression
Psychiatry Research: Neuroimaging
•
2017
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Analytics Method Development
Instrumentation Development
Signal Fluctuation Sensitivity: An Improved Metric for Optimizing Detection of Resting-State fMRI Networks
Frontiers in Neuroscience
•
2016
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Clinical Neuroscience
Clinically Anxious Individuals Show Disrupted Feedback Between Inferior Frontal Gyrus and Prefrontal-Limbic Control Circuit
Journal of Neuroscience
•
2016
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Clinical Neuroscience
Power Spectrum Scale Invariance as a Neural Marker of Cocaine Misuse and Altered Cognitive Control
NeuroImage: Clinical
•
2016
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Clinical Neuroscience
Abnormal Hippocampal Structure and Function in Anxiety and Depression
Hippocampus
•
2016
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Clinical Neuroscience
Left Medial Orbitofrontal Cortex Volume Correlates with Skydive-Elicited Euphoric Experience
Brain Structure and Function
•
2016
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Clinical Neuroscience
Using network dynamic fMRI for detection of epileptogenic foci
BMC Neurology
•
2015
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Clinical Neuroscience
Acute psychological stress induces short-term variable immune response
Brain, Behavior, and Immunity
•
2015
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Instrumentation Development
Sulfobutyl Ether β-Cyclodextrin (Captisol®) and Methyl β-Cyclodextrin Enhance and Stabilize Fluorescence of Aqueous Indocyanine Green
Journal of Biomedical Materials Research Part B: Applied Biomaterials
•
2015
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Clinical Neuroscience
Anticipation of high arousal aversive and positive movie clips engages common and distinct neural substrates
Social Cognitive and Affective Neuroscience
•
2015
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Clinical Neuroscience
Facilitated attentional orienting and delayed disengagement to conscious and nonconscious fearful faces.
Nonverbal Behavior
•
2014
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Analytics Method Development
Network connectivity modulates power spectrum scale invariance
Neuroimage
•
2014
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Clinical Neuroscience
Analytics Method Development
The Fine Line Between 'Brave' and 'Reckless': Amygdala Reactivity and Regulation Predict Recognition of Risk
Neuroimage
•
2014
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Clinical Neuroscience
Circuit-wide structural and functional measures predict ventromedial prefrontal cortex fear generalization: implications for generalized anxiety disorder
Journal of Neuroscience
•
2014
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Clinical Neuroscience
Hyper-reactive human ventral tegmental area and aberrant mesocorticolimbic connectivity in overgeneralization of fear in generalized anxiety disorder
Journal of Neuroscience
•
2014
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Clinical Neuroscience
Influence of the BDNF Genotype on Amygdalo-Prefrontal White Matter Microstructure is Linked to Nonconscious Attention Bias to Threat
Cerebral Cortex
•
2014
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Analytics Method Development
Optimizing complexity measures for FMRI data: algorithm, artifact, and sensitivity
PLos One
•
2013
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Clinical Neuroscience
Human gender differences in the perception of conspecific alarm chemosensory cues
PLos One
•
2013
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Clinical Neuroscience
Ventromedial prefrontal cortex reactivity is altered in generalized anxiety disorder during fear generalization
Depression and Anxiety
•
2013
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Clinical Neuroscience
Analytics Method Development
Multiple kernel learning captures a systems-level functional connectivity biomarker signature in amyotrophic lateral sclerosis
PLoS One
•
2013
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Analytics Method Development
Combining classification with fMRI-derived complex network measures for potential neurodiagnostics
PLoS One
•
2013
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Clinical Neuroscience
Small-world network properties in prefrontal cortex correlate with predictors of psychopathology risk in young children
Neuroimage
•
2014
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Clinical Neuroscience
Functional and structural amygdala-anterior cingulate connectivity correlates with attentional bias to masked fearful faces
Cortex
•
2013
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Clinical Neuroscience
Instrumentation Development
Second-hand stress: inhalation of stress sweat enhances neural response to neutral faces
Social Cognitive and Affective Neuroscience
•
2012
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Clinical Neuroscience
Power spectrum scale invariance identifies prefrontal dysregulation in paranoid schizophrenia
Human Brain Mapping
•
2011
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Clinical Neuroscience
The orienting of spatial attention to backward masked fearful faces is associated with variation in the serotonin transporter gene
Emotion
•
2012
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Clinical Neuroscience
Nonconscious attention bias to threat is correlated with anterior cingulate cortex gray matter volume: a voxel-based morphometry result and replication
NeuroImage
•
2012
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Clinical Neuroscience
Neural reactivity tracks fear generalization gradients
Biological Psychology
•
2013
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Clinical Neuroscience
Trait reappraisal is associated with resilience to acute psychological stress
Journal of Research in Personality
•
2012
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Analytics Method Development
Instrumentation Development
A stand-alone method for anatomical localization of NIRS measurements
NeuroImage
•
2011
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Analytics Method Development
The NIRS Analysis Package: noise reduction and statistical inference
PLOS One
•
2011
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Clinical Neuroscience
Acute stress eliminates female advantage in detection of ambiguous negative affect
Evolutionary Psychology
•
2011
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Clinical Neuroscience
Feeling anxious: anticipatory amygdalo-insular response predicts the feeling of anxious anticipation
Social Cognitive and Affective Neuroscience
•
2011
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Clinical Neuroscience
Ventral striatal and medial prefrontal BOLD activation is correlated with reward-related electrocortical activity: a combined ERP and fMRI study
NeuroImage
•
2011
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Clinical Neuroscience
Analytics Method Development
Power spectrum scale invariance quantifies limbic dysregulation in trait anxious adults using fMRI: adapting methods optimized for characterizing autonomic dysregulation to neural dynamic time series.
NeuroImage
•
2010
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Clinical Neuroscience
Ambulatory and challenge-associated heart rate variability measures predict cardiac responses to real-world acute emotional stress.
Biological Psychiatry
•
2010
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Clinical Neuroscience
A disposition to reappraise decreases anterior insula reactivity during anxious anticipation
Biological Psychology
•
2010
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Clinical Neuroscience
Blind rage? Heightened anger is associated with altered amygdala responses to masked and unmasked fearful faces
Psychiatry Research
•
2009
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Clinical Neuroscience
Analytics Method Development
Power Spectrum Density and Shannon Entropy Methods Quantify Limbic Dysregulation using fMRI and NIRS.
Neuroimage
•
2009
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Clinical Neuroscience
Anger expression and stress responses in military men
Aviation, Space, and Environmental Medicine
•
2009
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Clinical Neuroscience
Behavioral predictors of acute stress symptoms during intense military training
Journal of Traumatic Stress
•
2009
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Clinical Neuroscience
A principal component network analysis of prefrontal-limbic functional magnetic resonance imaging time series in schizophrenia patients and healthy controls
Psychiatry Research
•
2009
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Clinical Neuroscience
Analytics Method Development
Instrumentation Development
Chemosensory cues to conspecific emotional stress activate amygdala in humans.
PLoS One
•
2009
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Clinical Neuroscience
Higher body fat percentage is associated with increased cortisol reactivity and impaired cognitive resilience in response to acute emotional stress
International Journal of Obesity
•
2009
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Clinical Neuroscience
Analytics Method Development
Limbic dysregulation is associated with lowered heart rate variability and increased trait anxiety in healthy adults
Human Brain Mapping
•
2009
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Clinical Neuroscience
Physical fitness influences stress reactions to extreme military training
Military Medicine
•
2008
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Clinical Neuroscience
A systems approach to prefrontal-limbic dysregulation in schizophrenia
Neuropsychobiology
•
2008
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Clinical Neuroscience
Stressful military training: endocrine reactivity, performance, and psychological impact
Aviation, Space, and Environmental Medicine
•
2007
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Clinical Neuroscience
Neurophysiologic methods to measure stress during survival, evasion, resistance, and escape training
Aviation, Space, and Environmental Medicine
•
2007
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Analytics Method Development
Nonlinear complexity and spectral analyses of heart rate variability in medicated and unmedicated patients with schizophrenia
Neuropsychobiology
•
2005
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Clinical Neuroscience
The reliability and clinical correlates of figure-ground perception in schizophrenia
Neuropsychology
•
2004
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Clinical Neuroscience
Resting neural activity distinguishes subgroups of schizophrenia patients
Biological Psychiatry
•
2004
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Clinical Neuroscience
Are cognitive symptoms of schizophrenia mediated by abnormalities in emotional arousal?
CNS Spectrums
•
2002
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Clinical Neuroscience
Could stress cause psychosis in individuals vulnerable to schizophrenia?
CNS Spectrums
•
January 2002
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Clinical Neuroscience
Cultural invariance and the diagnosis of delusions: information processing as a neurobiologically preferable criterion
Journal of Neuropsychiatry and Clinical Neurosciences
•
2001
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Clinical Neuroscience
Logical processing, affect, and delusional thought in schizophrenia
Harvard Review of Psychiatry
•
2000
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State University of New York at Stony Brook
Laufer Center for Physical and Quantitative Biology

Stony Brook, NY 11794-5252
Mass General Hospital–MIT–Harvard Medical School
Athinoula A. Martinos Center for Biomedical Imaging
Boston, MA 02129
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